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Species belonging to selected taxon:
Saccharum officinarum
ABOUT THIS RECORD
ID:
MNEST002493
species:
Saccharum officinarum
miRNA family:
MIRf1463
source:
miRNEST
Taxonomy by NCBI:
Saccharum officinarum
Saccharum officinarum complex
Saccharum
Andropogoneae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGATGCCGTAGTCCATCAGCG
miRNA*
TCCATGGACGCGGCGTCATA
mismatches:
3
bulges:
1
View larger
pre-miRNA
CACAACGGAGCGAGTGCAGGGACGCCGAGGTG
TCCATGGACGCGGCGTCATA
CATGCAGCGGCTCTCCGTCGTCT
CGATGCCGTAGTCCATCAGCG
GGCG
GCGCTCCAGCTCGTCGTCGTGATCG
dot-bracket secondary structure
(((.(((..((((((....((((((((...((
(..((((((((((((((...
...((.((((....)))).))..
.)))))))).))))))..)))
..))
))).))).))))))))).)))....
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10620-akr
:
0.0001
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record